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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA042283
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Medium
Synapses
Not detected
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 187.3
Samples: 160
Max pTPM: 577.6
Min pTPM: 6.2
Std pTPM: 118.7
Median pTPM: 192.3
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
577.6
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
493.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
481.6
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
436.2
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
396.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
395.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
390.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
388.8
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
384.3
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
382.5
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
382.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
371.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
358.1
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
351.8
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
351.1
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
347.1
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
343.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
339.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
335.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
333.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
318.4
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
315.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
307.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
305.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
305.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
304.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
301.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
291.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
288.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
287.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
287.6
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
287.1
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
286.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
282.0
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
280.1
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
279.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
275.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
275.3
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
273.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
272.6
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
271.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
269.0
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
264.7
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
263.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
261.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
260.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
258.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
256.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
255.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
255.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
253.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
251.3
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
248.2
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
246.1
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
242.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
242.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
233.9
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
232.6
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
231.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
231.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
226.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
222.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
222.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
221.4
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
218.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
217.3
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
213.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
213.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
211.8
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
211.6
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
210.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
209.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
208.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
205.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
203.7
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
200.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
199.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
199.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
196.4
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
193.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
191.6
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
190.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
189.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
188.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
177.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
168.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
168.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
168.0
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
166.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
165.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
156.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
154.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
154.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
151.4
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
151.4
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
150.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
150.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
147.7
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
145.1
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
139.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
136.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
135.2
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
129.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
129.4
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
128.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
128.4
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
125.8
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
113.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
112.6
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
105.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
104.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
103.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
98.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
97.5
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
97.1
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
96.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
92.4
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
89.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
87.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
77.9
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
74.8
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
74.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
72.2
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
69.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
67.0
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
61.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
59.6
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
55.7
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
55.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
54.7
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
51.8
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
51.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
49.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
48.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
48.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
46.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
44.3
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
42.3
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
40.3
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
38.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
38.5
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
37.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
37.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
37.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
35.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
35.0
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
31.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
28.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
27.2
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
23.7
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
23.1
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
22.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
21.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
19.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
19.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
13.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
13.4
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
10.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
9.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
6.2
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.