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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 182.7
Min pTPM: 2.4
Std pTPM: 34.8
Median pTPM: 47.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
182.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
160.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
156.8
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
153.8
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
145.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
133.9
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
133.4
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
131.7
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
130.0
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
119.5
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
111.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
101.4
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
100.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
99.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
97.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
97.4
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
90.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
86.7
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
86.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
85.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
80.8
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
80.7
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
80.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
77.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
76.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
76.7
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
75.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
74.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
74.3
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
72.1
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
68.5
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
68.3
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
67.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
66.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
66.0
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
65.2
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
63.3
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
61.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
61.7
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
61.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
60.4
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
59.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
59.4
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
57.7
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
57.7
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
57.0
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
56.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
55.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
53.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
53.0
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
52.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
51.6
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
50.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
50.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
49.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
49.1
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
48.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
48.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
47.6
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
47.4
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
47.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
47.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
47.1
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
47.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
45.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
44.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
44.5
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
44.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
43.7
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
43.1
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
43.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
42.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
41.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
40.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
40.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
39.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
39.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
38.7
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
38.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
37.8
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
37.5
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
37.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
36.2
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
35.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
34.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
34.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
33.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
33.4
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
33.0
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
32.8
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
32.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
32.3
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
32.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
32.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
31.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
30.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
29.8
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
29.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
28.8
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
28.8
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
28.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
28.1
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
27.1
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
26.1
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
25.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
23.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
23.7
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
22.5
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
20.6
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
20.4
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
19.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
19.4
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
19.3
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
19.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
18.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
18.6
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
18.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
16.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
15.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
15.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
14.9
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
14.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
2.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.