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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 14332.2
Min pTPM: 383.5
Std pTPM: 2351.0
Median pTPM: 2229.6
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
14332.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
11732.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
9880.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
8188.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
8072.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
7284.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
7243.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
6911.0
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
5840.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
5702.0
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
5659.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
5128.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
4863.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
4780.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
4759.1
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
4688.8
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
4513.5
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
4484.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
4471.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
4361.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
4249.6
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
3972.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
3964.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
3902.0
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
3729.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
3680.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
3612.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
3580.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
3234.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
3162.9
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
3149.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
3110.9
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
2945.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
2891.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
2887.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
2863.1
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
2744.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
2730.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
2691.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
2662.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
2626.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
2616.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
2609.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
2522.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
2454.8
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
2426.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
2419.2
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
2412.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
2274.5
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
2271.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
2187.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
2173.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
2171.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
2108.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
2038.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
2024.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
1998.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1928.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
1913.4
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
1903.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
1886.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
1880.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
1854.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
1837.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1726.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1703.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
1695.3
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
1634.6
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
1624.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
1623.4
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
1610.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
1561.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
1559.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1518.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
1464.5
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
1431.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
1426.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
1352.0
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
1339.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
1261.4
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
1182.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
1165.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
1158.9
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
1135.7
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
1112.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
1111.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
997.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
974.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
967.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
882.1
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
862.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
844.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
840.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
791.0
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
729.7
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
718.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
673.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
647.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
585.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
383.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.