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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 14816.9
Min pTPM: 751.7
Std pTPM: 2798.4
Median pTPM: 5484.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
14816.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
13542.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
12942.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
12756.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
12207.0
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
11299.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
11104.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
9557.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
9555.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
9505.7
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
9482.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
9379.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
9373.8
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
9236.2
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
8667.8
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
8094.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
8081.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
8081.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
8046.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
7970.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
7809.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
7613.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
7399.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
7242.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
7104.5
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
7090.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
6969.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
6961.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
6859.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
6688.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
6569.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
6524.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
6465.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
6407.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
6405.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
6307.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
6240.0
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
6071.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
6039.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
5940.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
5750.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
5685.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
5642.9
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
5612.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
5355.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
5353.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
5332.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
5278.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
5257.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
5209.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
5142.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
4987.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
4847.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
4742.8
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
4735.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
4727.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
4678.9
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
4619.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
4587.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
4571.1
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
4546.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
4520.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
4476.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
4475.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
4321.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
4128.7
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
4051.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
3961.0
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
3837.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
3642.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
3605.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
3588.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
3482.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
3394.7
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
3391.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
3352.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
3290.0
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
3169.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
3096.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
2928.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
2915.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
2685.4
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
2600.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
2498.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
2471.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
2112.3
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
1834.5
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
751.7
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.