We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 60.9
Samples: 160
Max pTPM: 145.8
Min pTPM: 7.5
Std pTPM: 28.6
Median pTPM: 60.8
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
145.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
137.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
130.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
129.6
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
122.6
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
118.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
117.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
114.3
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
108.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
106.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
101.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
100.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
97.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
97.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
97.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
96.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
95.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
94.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
94.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
94.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
94.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
92.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
91.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
90.9
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
88.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
88.0
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
87.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
86.3
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
84.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
83.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
83.4
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
83.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
82.6
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
82.5
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
82.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
82.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
82.1
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
81.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
81.6
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
81.5
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
80.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
80.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
80.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
80.5
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
79.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
79.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
78.6
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
78.1
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
77.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
77.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
76.5
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
76.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
74.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
73.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
73.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
72.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
71.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
70.5
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
70.4
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
69.9
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
69.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
69.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
69.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
67.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
67.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
66.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
66.8
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
66.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
66.1
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
66.1
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
64.1
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
63.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
63.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
62.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
62.4
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
62.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
61.7
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
61.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
61.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
60.8
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
60.8
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
60.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
59.9
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
59.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
58.8
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
58.6
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
58.4
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
57.7
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
56.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
56.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
55.9
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
55.8
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
54.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
54.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
53.9
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
52.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
52.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
52.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
51.9
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
51.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
51.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
50.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
50.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
50.4
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
50.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
49.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
49.8
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
49.6
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
49.1
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
48.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
47.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
46.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
44.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
42.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
41.1
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
40.0
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
39.7
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
39.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
38.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
37.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
35.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
35.2
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
34.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
34.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
34.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
33.4
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
32.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
32.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
32.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
31.5
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
30.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
30.4
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
30.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
29.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
29.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
28.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
27.9
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
27.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
26.1
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
25.3
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
24.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
24.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
23.9
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
22.5
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
21.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
21.0
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
20.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
20.1
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
19.8
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
19.5
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
18.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
18.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
17.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
17.4
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
16.6
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
12.4
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
11.9
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
10.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
10.3
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
7.5
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.