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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 377.8
Min pTPM: 10.8
Std pTPM: 68.8
Median pTPM: 169.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
377.8
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
289.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
283.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
275.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
267.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
266.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
251.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
249.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
247.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
245.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
244.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
240.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
240.5
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
239.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
237.7
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
231.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
222.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
217.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
212.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
212.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
211.4
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
210.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
208.6
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
207.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
203.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
203.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
200.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
199.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
197.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
197.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
192.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
191.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
187.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
187.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
187.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
186.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
185.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
184.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
184.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
183.0
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
182.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
182.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
182.3
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
180.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
178.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
175.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
175.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
172.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
172.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
169.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
169.3
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
162.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
161.3
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
160.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
159.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
158.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
155.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
154.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
153.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
151.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
150.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
147.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
140.3
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
137.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
136.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
135.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
132.4
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
125.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
124.3
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
123.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
119.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
118.2
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
116.3
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
115.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
113.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
110.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
110.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
108.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
106.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
99.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
98.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
93.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
92.9
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
83.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
81.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
81.4
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
72.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
70.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
68.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
68.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
66.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
56.1
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
54.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
46.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
45.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
35.9
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
29.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
20.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
12.5
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
10.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.