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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1331.7
Min pTPM: 25.1
Std pTPM: 151.2
Median pTPM: 117.5
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
1331.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
508.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
432.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
324.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
292.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
278.9
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
274.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
262.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
255.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
246.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
241.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
238.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
236.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
231.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
231.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
219.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
195.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
190.9
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
189.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
187.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
186.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
172.2
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
169.0
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
161.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
160.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
156.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
155.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
154.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
151.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
151.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
149.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
145.0
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
134.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
133.3
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
133.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
130.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
130.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
125.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
122.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
122.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
122.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
118.2
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
117.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
117.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
117.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
114.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
108.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
108.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
107.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
106.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
106.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
103.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
101.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
100.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
99.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
99.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
98.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
96.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
95.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
95.3
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
95.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
90.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
88.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
87.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
87.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
84.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
83.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
80.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
73.2
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
73.2
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
72.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
72.1
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
71.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
70.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
70.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
69.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
65.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
65.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
62.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
59.9
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
57.5
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
53.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
53.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
48.1
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
46.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
42.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
42.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
25.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.