We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 229.6
Min pTPM: 2.0
Std pTPM: 47.0
Median pTPM: 48.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
229.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
208.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
173.6
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
171.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
169.2
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
135.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
125.2
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
117.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
116.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
112.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
106.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
99.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
97.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
97.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
93.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
93.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
91.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
86.1
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
85.0
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
83.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
81.4
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
80.3
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
78.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
76.3
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
74.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
73.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
70.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
68.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
68.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
67.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
64.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
63.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
58.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
58.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
57.6
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
57.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
54.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
52.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
51.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
51.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
50.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
50.1
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
49.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
49.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
48.1
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
45.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
45.1
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
40.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
40.4
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
38.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
38.2
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
37.7
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
37.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
32.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
29.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
29.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
28.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
27.8
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
27.7
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
26.8
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
26.3
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
25.6
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
24.8
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
24.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
21.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
20.5
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
19.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
19.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
17.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
16.0
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
15.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
14.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
13.9
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
11.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
10.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
9.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
8.6
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
8.0
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
7.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
6.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
6.2
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
5.5
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
5.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
4.3
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
4.1
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
3.3
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
2.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
2.0
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
MENU
