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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 372.2
Min pTPM: 22.3
Std pTPM: 55.7
Median pTPM: 139.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
372.2
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
260.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
244.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
239.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
225.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
225.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
222.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
219.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
219.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
213.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
210.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
198.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
194.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
190.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
185.1
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
184.0
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
183.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
183.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
181.6
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
181.3
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
177.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
176.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
171.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
170.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
170.2
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
170.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
170.1
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
169.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
169.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
168.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
167.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
166.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
164.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
161.3
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
160.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
157.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
156.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
155.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
155.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
154.9
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
153.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
151.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
151.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
148.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
143.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
142.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
141.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
140.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
140.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
139.3
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
138.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
138.1
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
136.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
136.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
136.5
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
135.6
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
133.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
131.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
127.2
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
126.4
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
125.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
124.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
123.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
111.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
111.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
110.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
109.0
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
108.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
107.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
107.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
107.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
106.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
105.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
101.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
98.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
97.6
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
97.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
97.4
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
96.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
94.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
93.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
89.6
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
86.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
84.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
77.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
75.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
73.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
69.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
69.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
67.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
65.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
65.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
64.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
58.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
55.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
53.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
49.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
44.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
35.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
22.3
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.