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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 182.4
Min pTPM: 6.3
Std pTPM: 34.5
Median pTPM: 58.4
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
182.4
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
157.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
147.3
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
138.7
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
133.8
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
133.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
129.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
121.4
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
120.4
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
118.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
117.8
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
117.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
115.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
113.8
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
112.2
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
111.2
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
110.2
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
107.5
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
106.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
104.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
103.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
99.8
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
99.1
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
97.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
96.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
92.2
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
91.8
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
89.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
89.2
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
83.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
83.5
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
81.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
80.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
79.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
78.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
78.8
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
76.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
75.6
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
72.9
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
72.9
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
72.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
72.2
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
71.2
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
70.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
69.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
69.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
69.2
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
68.7
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
67.5
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
67.5
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
66.4
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
66.3
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
66.2
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
64.6
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
63.8
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
61.9
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
60.5
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
60.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
59.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
58.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
58.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
58.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
58.1
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
57.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
57.2
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
56.8
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
55.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
55.0
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
54.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
54.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
53.9
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
52.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
52.1
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
51.7
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
51.4
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
50.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
50.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
47.3
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
47.2
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
46.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
46.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
45.2
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
45.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
44.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
44.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
43.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
43.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
42.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
42.4
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
41.6
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
39.9
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
39.1
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
39.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
39.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
38.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
37.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
36.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
34.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
31.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
31.3
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
30.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
30.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
30.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
30.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
28.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
27.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
27.5
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
25.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
24.8
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
24.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
23.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
23.4
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
23.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
23.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
22.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
22.4
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
21.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
21.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
19.9
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
19.8
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
13.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
8.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
6.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.