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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA051160
Glial cells
Not detected
Neuronal cells
Not detected
Neuronal projections
Not detected
Synapses
High
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 38.6
Samples: 160
Max pTPM: 141.3
Min pTPM: 1.0
Std pTPM: 31.9
Median pTPM: 31.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
141.3
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
138.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
122.4
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
115.4
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
111.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
111.2
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
108.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
105.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
102.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
101.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
100.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
99.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
91.3
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
87.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
87.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
86.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
84.8
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
83.7
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
78.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
78.4
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
75.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
74.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
73.8
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
73.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
73.0
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
69.7
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
65.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
65.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
64.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
64.9
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
62.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
62.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
62.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
61.7
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
61.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
61.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
60.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
59.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
59.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
58.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
58.5
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
58.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
58.3
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
58.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
57.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
57.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
56.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
53.9
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
53.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
53.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
53.4
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
50.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
47.4
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
47.1
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
46.4
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
45.4
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
45.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
44.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
44.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
44.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
42.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
42.4
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
41.9
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
41.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
40.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
39.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
39.5
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
39.0
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
37.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
36.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
36.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
35.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
34.2
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
33.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
33.0
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
32.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
32.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
32.3
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
32.0
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
31.3
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
30.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
30.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
30.5
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
30.4
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
29.6
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
29.3
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
28.2
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
27.3
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
25.9
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
25.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
25.1
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
24.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
24.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
24.0
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
23.0
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
22.3
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
22.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
22.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
22.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
21.3
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
21.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
20.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
20.3
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
20.1
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
19.2
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
18.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
17.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
16.6
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
16.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
16.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
15.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
15.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
15.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
14.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
13.9
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
13.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
12.3
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
12.0
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
11.4
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
11.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
10.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
9.8
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
9.8
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
9.8
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
8.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
8.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
8.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
8.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
7.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
7.6
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
7.4
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
7.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
6.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
6.8
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
6.7
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
6.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
5.8
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
5.8
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
5.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
5.4
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
5.4
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
5.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
5.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
4.8
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
4.7
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
4.6
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
4.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
4.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
3.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
3.7
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
3.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
3.0
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
3.0
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
2.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
2.5
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
2.5
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
2.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
2.2
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
1.6
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
1.0
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.