We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 10.8
Samples: 160
Max pTPM: 34.0
Min pTPM: 2.5
Std pTPM: 6.1
Median pTPM: 8.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
34.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
31.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
30.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
29.2
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
27.3
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
26.7
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
25.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
25.1
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
24.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
23.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
22.5
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
21.1
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
20.4
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
20.3
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
20.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
19.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
19.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
19.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
17.9
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
17.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
17.7
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
17.1
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
17.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
16.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
16.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
16.3
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
16.1
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
14.9
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
14.7
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
14.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
14.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
14.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
14.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
14.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
14.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
13.8
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
13.7
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
13.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
13.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
13.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
13.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
13.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
12.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
12.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
12.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
12.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
12.1
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
12.0
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
12.0
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
11.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
11.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
11.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
11.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
11.3
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
11.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
11.1
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
11.0
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
11.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
11.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
10.8
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
10.7
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
10.6
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
10.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
10.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
10.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
10.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
9.9
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
9.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
9.6
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
9.4
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
9.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
9.2
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
9.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
9.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
9.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
9.1
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
9.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
8.9
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
8.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
8.8
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
8.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
8.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
8.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
8.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
8.5
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
8.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
8.3
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
8.3
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
8.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
8.0
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
8.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
8.0
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
8.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
7.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
7.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
7.8
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
7.8
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
7.8
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
7.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
7.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
7.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
7.7
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
7.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
7.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
7.5
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
7.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
7.5
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
7.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
7.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
7.3
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
7.2
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
7.2
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
7.1
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
7.1
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
7.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
6.9
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
6.9
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
6.8
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
6.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
6.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
6.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
6.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
6.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
6.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
6.3
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
6.3
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
6.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
6.1
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
6.1
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
6.1
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
6.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
5.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
5.8
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
5.8
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
5.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
5.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
5.4
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
5.4
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
5.3
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
5.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
5.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
5.1
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
5.1
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
5.0
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
5.0
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
4.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
4.7
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
4.7
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
4.7
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
4.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
4.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
4.5
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
4.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
4.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
4.3
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
4.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
4.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
3.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
2.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
2.5
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.