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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 93.9
Min pTPM: 0.2
Std pTPM: 11.8
Median pTPM: 1.0
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
93.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
50.2
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
35.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
20.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
13.5
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
7.9
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
6.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
5.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
4.7
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
3.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
3.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
2.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
2.6
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
2.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
2.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
2.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
2.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
2.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
2.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
1.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
1.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
1.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
1.8
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
1.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
1.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
1.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
1.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
1.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
1.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
1.5
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
1.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
1.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
1.3
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
1.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
1.3
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
1.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
1.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
1.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
1.2
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
1.2
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
1.1
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
1.1
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
1.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
1.0
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
1.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
1.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
0.9
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
0.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
0.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
0.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
0.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
0.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
0.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
0.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
0.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
0.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
0.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
0.7
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
0.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
0.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
0.7
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
0.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
0.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
0.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
0.6
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
0.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
0.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
0.6
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
0.6
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
0.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
0.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
0.5
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
0.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
0.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
0.5
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
0.5
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
0.5
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
0.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
0.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
0.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
0.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
0.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
0.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
0.3
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
0.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
0.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
0.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
0.2
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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