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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 120.9
Min pTPM: 1.2
Std pTPM: 26.7
Median pTPM: 35.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
120.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
107.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
103.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
93.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
89.9
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
87.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
82.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
80.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
78.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
78.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
77.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
76.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
71.5
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
67.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
67.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
66.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
65.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
63.7
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
63.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
60.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
60.2
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
58.9
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
58.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
56.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
55.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
54.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
53.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
51.4
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
51.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
50.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
50.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
50.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
48.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
48.5
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
47.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
47.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
45.2
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
45.1
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
44.4
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
44.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
42.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
41.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
41.1
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
40.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
39.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
38.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
37.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
36.8
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
36.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
35.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
35.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
35.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
34.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
31.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
31.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
30.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
30.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
30.6
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
30.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
26.9
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
26.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
26.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
25.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
25.1
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
24.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
24.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
23.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
22.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
21.8
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
21.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
20.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
20.0
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
15.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
14.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
13.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
13.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
12.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
12.5
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
12.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
11.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
11.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
11.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
10.6
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
10.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
9.6
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
9.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
8.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
8.2
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
7.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
7.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
7.0
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
6.7
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
6.2
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
5.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
5.1
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
4.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
3.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
3.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
2.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
1.2
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.