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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 175.4
Min pTPM: 2.8
Std pTPM: 34.9
Median pTPM: 28.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
175.4
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
159.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
144.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
121.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
118.5
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
97.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
94.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
91.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
90.4
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
85.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
85.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
84.9
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
77.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
77.2
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
76.9
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
73.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
71.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
70.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
63.4
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
61.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
61.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
60.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
59.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
57.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
56.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
55.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
53.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
50.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
49.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
47.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
46.0
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
43.7
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
43.3
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
43.2
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
41.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
38.2
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
38.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
37.4
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
37.1
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
35.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
33.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
32.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
32.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
31.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
31.1
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
30.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
30.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
28.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
28.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
28.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
28.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
27.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
27.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
25.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
23.9
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
23.4
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
22.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
22.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
21.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
21.3
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
20.7
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
19.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
18.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
18.4
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
17.9
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
17.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
15.6
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
15.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
14.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
13.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
13.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
13.1
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
13.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
12.9
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
12.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
12.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
11.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
11.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
9.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
9.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
9.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
9.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
9.1
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
8.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
8.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
7.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
7.5
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
6.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
6.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
6.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
6.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
6.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
5.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
5.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
5.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
5.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
5.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
4.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.