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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 626.0
Min pTPM: 11.1
Std pTPM: 101.6
Median pTPM: 121.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
626.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
368.1
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
363.1
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
362.3
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
346.7
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
309.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
307.6
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
306.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
285.1
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
266.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
257.9
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
257.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
254.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
247.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
226.8
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
225.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
221.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
220.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
216.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
210.0
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
193.5
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
178.8
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
174.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
174.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
166.2
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
155.7
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
152.6
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
152.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
148.8
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
147.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
141.2
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
140.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
140.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
139.9
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
134.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
133.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
132.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
130.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
129.0
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
128.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
128.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
123.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
123.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
123.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
120.1
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
117.6
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
103.9
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
101.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
101.6
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
100.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
99.0
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
98.7
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
97.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
95.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
94.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
90.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
88.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
83.9
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
83.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
82.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
80.2
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
79.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
78.4
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
77.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
73.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
71.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
69.6
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
68.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
67.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
60.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
57.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
56.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
55.7
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
54.9
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
54.5
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
53.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
53.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
50.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
44.8
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
42.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
34.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
33.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
30.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
27.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
25.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
24.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
22.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
11.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.