We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 278.5
Samples: 160
Max pTPM: 1150.7
Min pTPM: 2.4
Std pTPM: 248.7
Median pTPM: 213.3
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
1150.7
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
1044.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
981.5
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
947.3
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
831.4
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
809.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
807.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
804.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
793.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
750.0
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
679.2
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
670.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
662.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
642.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
636.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
632.0
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
626.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
610.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
608.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
597.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
593.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
582.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
576.7
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
533.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
526.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
507.8
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
507.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
494.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
493.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
491.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
489.7
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
483.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
472.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
465.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
463.4
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
449.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
444.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
443.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
443.1
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
442.2
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
433.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
421.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
418.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
414.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
408.6
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
407.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
400.8
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
400.2
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
399.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
396.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
386.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
382.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
351.9
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
345.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
345.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
342.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
341.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
341.2
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
329.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
323.2
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
307.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
306.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
302.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
300.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
295.2
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
292.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
291.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
289.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
279.1
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
271.0
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
268.3
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
265.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
260.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
258.3
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
250.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
249.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
245.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
244.7
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
235.1
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
213.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
213.3
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
213.2
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
212.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
191.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
182.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
179.0
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
176.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
171.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
170.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
169.9
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
168.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
163.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
161.4
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
152.7
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
152.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
146.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
143.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
141.4
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
135.3
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
133.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
128.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
121.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
116.7
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
114.5
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
111.5
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
107.0
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
106.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
102.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
100.6
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
98.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
88.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
88.7
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
86.7
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
76.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
75.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
74.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
70.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
68.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
67.6
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
62.0
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
61.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
53.6
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
52.0
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
47.8
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
47.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
47.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
45.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
43.6
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
42.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
40.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
40.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
40.3
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
39.2
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
38.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
38.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
32.5
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
29.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
27.2
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
25.0
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
23.0
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
23.0
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
22.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
22.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
21.2
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
20.9
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
20.2
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
18.3
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
17.9
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
16.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
16.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
15.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
14.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
12.3
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
12.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
10.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
7.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
6.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
6.3
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
5.7
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
2.4
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.