We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 65.2
Samples: 160
Max pTPM: 152.8
Min pTPM: 6.0
Std pTPM: 31.8
Median pTPM: 64.0
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
152.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
151.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
144.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
142.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
132.0
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
130.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
129.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
127.7
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
124.5
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
118.1
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
114.4
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
114.3
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
113.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
109.9
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
108.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
106.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
106.6
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
103.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
102.8
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
102.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
101.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
100.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
95.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
95.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
95.5
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
95.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
95.1
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
94.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
94.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
92.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
92.0
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
91.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
91.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
90.6
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
88.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
88.1
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
86.1
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
85.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
85.5
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
84.4
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
83.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
83.5
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
83.3
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
82.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
82.4
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
81.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
81.3
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
80.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
79.6
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
79.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
78.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
78.4
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
78.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
78.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
77.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
77.4
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
75.6
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
75.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
74.6
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
74.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
74.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
74.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
73.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
73.5
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
73.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
72.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
71.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
71.4
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
71.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
70.9
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
70.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
70.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
69.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
68.3
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
66.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
65.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
64.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
64.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
64.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
64.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
63.9
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
63.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
63.3
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
62.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
62.0
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
61.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
61.2
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
60.9
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
60.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
60.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
60.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
60.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
60.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
59.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
59.6
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
59.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
57.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
57.4
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
56.3
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
56.2
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
53.6
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
53.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
53.0
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
52.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
52.2
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
51.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
51.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
49.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
48.5
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
48.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
48.1
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
47.2
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
46.7
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
45.8
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
44.3
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
42.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
41.4
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
40.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
39.0
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
38.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
38.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
38.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
37.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
36.6
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
36.1
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
35.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
34.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
33.6
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
33.1
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
32.4
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
31.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
31.5
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
31.3
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
29.5
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
28.7
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
28.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
26.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
26.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
26.3
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
26.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
25.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
25.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
23.8
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
23.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
23.3
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
23.2
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
23.0
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
22.2
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
21.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
19.6
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
19.4
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
19.4
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
17.5
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
16.0
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
15.6
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
14.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
13.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
13.0
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
12.2
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
6.0
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.