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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 769.8
Min pTPM: 2.4
Std pTPM: 134.9
Median pTPM: 93.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
769.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
628.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
508.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
400.6
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
364.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
353.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
350.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
338.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
326.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
294.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
283.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
274.4
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
273.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
267.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
263.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
253.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
241.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
241.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
232.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
230.1
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
221.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
205.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
204.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
198.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
195.3
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
192.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
184.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
169.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
165.2
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
150.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
140.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
137.0
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
136.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
132.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
129.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
128.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
126.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
126.0
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
125.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
110.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
109.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
108.6
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
107.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
107.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
106.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
102.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
102.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
100.1
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
99.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
93.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
92.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
90.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
90.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
90.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
83.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
82.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
77.0
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
75.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
73.6
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
67.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
66.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
66.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
64.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
57.4
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
55.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
55.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
52.4
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
44.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
42.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
34.9
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
32.9
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
30.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
30.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
27.6
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
27.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
26.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
25.6
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
25.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
25.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
25.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
24.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
19.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
18.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
16.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
15.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
14.7
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
9.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
9.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
9.0
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
8.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
8.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
8.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
8.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
7.0
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
6.8
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
4.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
3.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
3.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
2.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
2.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.