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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 61.7
Min pTPM: 5.0
Std pTPM: 11.5
Median pTPM: 19.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
61.7
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
55.6
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
52.2
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
48.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
46.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
45.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
43.5
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
43.0
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
41.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
39.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
36.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
33.8
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
33.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
32.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
30.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
30.0
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
29.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
28.8
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
28.6
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
28.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
27.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
27.7
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
27.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
26.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
26.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
26.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
25.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
24.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
24.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
23.9
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
23.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
22.8
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
22.4
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
22.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
22.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
22.3
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
21.9
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
20.2
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
19.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
19.8
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
19.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
19.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
19.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
19.1
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
19.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
19.0
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
18.8
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
18.6
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
18.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
18.3
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
18.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
18.0
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
17.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
17.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
17.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
17.4
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
16.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
16.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
16.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
16.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
16.1
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
16.1
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
15.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
15.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
15.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
14.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
14.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
14.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
13.6
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
13.5
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
13.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
12.9
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
12.5
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
12.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
12.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
11.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
11.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
11.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
10.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
10.7
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
10.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
8.8
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
8.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
8.5
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
7.1
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
6.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
6.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
5.0
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.