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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1679.0
Min pTPM: 16.4
Std pTPM: 283.6
Median pTPM: 133.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1679.0
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
1194.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
1069.5
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
984.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
959.3
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
703.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
664.5
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
593.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
582.9
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
559.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
481.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
458.7
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
451.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
434.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
421.4
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
421.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
400.7
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
367.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
347.6
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
347.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
321.4
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
313.2
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
285.6
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
271.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
262.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
247.5
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
243.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
241.6
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
238.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
234.5
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
217.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
210.8
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
203.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
192.7
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
184.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
174.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
164.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
164.5
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
159.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
158.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
155.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
152.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
142.1
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
135.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
131.1
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
127.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
125.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
122.3
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
121.1
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
119.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
119.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
115.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
114.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
113.7
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
112.3
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
111.3
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
109.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
108.4
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
94.7
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
92.1
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
87.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
87.2
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
83.4
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
81.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
80.4
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
78.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
74.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
72.3
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
69.6
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
67.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
65.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
65.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
59.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
59.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
58.5
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
55.4
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
52.6
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
52.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
50.8
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
49.9
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
49.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
48.4
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
39.4
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
36.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
30.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
24.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
17.1
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
16.4
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.