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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA015247
Glial cells
Medium
Neuronal cells
Not detected
Neuronal projections
Not detected
Synapses
Not detected
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 159.9
Samples: 160
Max pTPM: 493.6
Min pTPM: 29.9
Std pTPM: 76.6
Median pTPM: 152.8
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
493.6
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
350.9
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
340.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
333.4
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
318.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
316.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
311.3
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
291.1
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
287.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
283.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
283.3
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
276.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
276.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
272.7
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
272.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
271.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
271.2
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
264.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
260.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
255.0
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
252.7
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
250.5
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
247.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
245.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
243.1
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
240.8
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
229.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
226.6
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
226.6
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
225.7
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
225.6
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
224.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
222.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
221.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
221.2
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
217.9
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
215.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
211.7
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
208.2
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
207.2
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
205.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
205.0
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
203.3
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
202.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
202.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
196.1
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
195.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
191.1
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
189.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
183.2
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
183.1
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
182.7
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
180.2
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
179.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
178.6
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
177.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
177.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
175.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
173.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
173.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
172.1
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
172.0
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
170.6
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
170.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
169.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
168.5
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
166.7
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
166.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
165.7
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
165.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
165.3
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
165.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
164.2
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
163.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
158.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
156.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
155.5
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
154.2
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
153.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
153.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
152.1
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
150.0
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
147.8
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
147.1
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
146.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
145.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
144.8
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
139.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
138.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
136.4
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
135.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
134.4
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
134.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
132.3
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
132.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
131.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
130.6
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
128.4
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
126.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
126.2
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
120.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
120.6
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
120.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
119.9
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
119.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
119.6
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
119.3
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
113.8
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
113.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
112.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
110.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
109.6
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
109.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
108.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
107.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
106.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
106.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
100.7
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
100.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
100.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
100.1
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
100.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
100.0
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
98.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
97.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
96.6
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
94.2
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
91.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
91.2
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
90.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
89.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
89.4
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
87.0
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
86.0
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
85.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
84.5
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
84.4
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
84.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
83.1
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
80.0
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
79.1
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
77.4
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
76.6
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
76.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
75.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
70.9
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
66.1
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
63.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
61.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
61.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
58.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
52.0
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
49.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
47.4
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
44.1
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
43.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
39.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
39.2
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
37.0
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
29.9
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.