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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 385.0
Min pTPM: 1.5
Std pTPM: 69.9
Median pTPM: 48.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
385.0
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
338.9
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
313.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
309.3
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
240.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
239.2
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
224.8
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
204.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
173.9
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
165.7
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
159.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
156.9
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
137.7
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
132.6
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
132.5
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
129.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
127.9
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
124.8
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
115.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
112.0
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
108.2
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
105.9
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
101.4
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
100.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
99.5
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
99.5
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
96.4
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
93.6
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
92.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
90.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
90.0
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
85.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
83.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
81.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
81.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
80.2
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
78.2
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
76.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
75.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
73.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
73.0
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
71.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
70.5
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
70.4
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
67.9
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
66.6
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
64.4
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
63.3
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
62.2
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
61.3
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
58.9
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
57.6
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
57.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
56.7
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
53.8
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
53.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
53.1
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
52.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
50.6
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
48.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
48.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
48.3
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
48.3
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
48.1
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
48.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
46.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
46.5
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
46.1
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
43.7
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
41.3
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
40.6
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
39.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
38.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
38.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
35.6
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
34.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
33.4
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
31.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
30.5
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
29.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
29.1
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
28.9
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
28.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
27.7
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
27.3
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
26.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
25.4
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
25.3
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
25.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
23.5
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
23.3
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
23.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
22.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
22.4
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
22.3
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
22.3
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
22.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
21.9
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
20.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
19.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
19.0
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
17.0
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
17.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
16.5
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
15.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
15.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
14.9
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
14.0
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
13.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
12.6
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
12.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
11.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
11.1
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
11.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
10.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
10.6
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
9.3
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
7.4
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
6.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
5.8
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
4.4
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
4.1
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
1.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.