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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 191.6
Min pTPM: 12.3
Std pTPM: 35.1
Median pTPM: 51.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
191.6
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
182.1
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
161.8
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
123.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
121.6
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
118.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
110.1
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
107.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
106.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
102.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
98.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
98.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
96.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
94.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
86.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
82.9
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
79.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
78.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
78.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
77.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
76.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
75.9
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
74.1
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
73.1
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
72.6
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
69.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
68.2
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
67.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
67.3
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
66.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
65.8
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
62.9
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
61.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
60.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
60.1
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
58.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
57.7
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
57.6
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
57.2
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
55.8
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
54.1
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
53.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
53.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
52.0
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
51.9
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
51.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
51.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
51.2
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
51.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
48.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
47.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
46.6
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
44.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
43.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
40.5
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
40.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
39.5
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
39.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
38.4
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
37.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
37.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
36.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
36.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
35.6
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
35.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
35.0
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
33.7
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
31.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
31.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
29.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
28.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
27.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
27.1
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
25.7
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
25.4
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
24.8
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
24.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
23.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
23.0
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
22.1
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
21.4
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
21.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
20.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
20.0
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
19.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
19.0
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
12.6
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
12.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.