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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 536.4
Min pTPM: 14.5
Std pTPM: 92.4
Median pTPM: 121.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
536.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
432.7
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
386.1
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
316.1
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
310.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
304.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
262.5
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
253.1
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
246.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
242.6
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
240.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
232.2
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
231.5
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
227.7
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
224.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
209.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
208.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
196.5
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
194.1
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
191.9
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
191.5
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
176.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
175.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
172.2
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
171.9
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
171.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
167.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
162.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
155.1
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
153.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
152.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
147.8
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
143.9
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
143.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
135.7
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
134.8
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
132.2
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
130.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
124.1
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
123.3
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
123.0
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
122.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
122.6
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
121.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
121.1
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
116.7
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
115.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
115.3
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
112.2
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
106.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
101.1
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
98.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
95.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
95.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
94.9
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
94.7
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
94.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
92.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
92.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
89.7
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
89.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
88.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
88.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
87.4
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
84.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
77.6
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
75.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
70.0
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
68.1
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
65.4
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
63.1
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
61.0
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
59.5
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
59.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
57.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
55.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
50.1
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
50.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
49.0
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
42.1
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
37.7
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
35.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
34.9
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
23.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
20.1
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
19.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
19.8
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
14.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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