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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 787.9
Min pTPM: 9.5
Std pTPM: 163.2
Median pTPM: 151.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
787.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
751.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
707.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
574.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
486.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
483.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
467.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
465.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
461.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
428.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
405.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
394.9
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
386.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
377.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
372.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
365.2
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
364.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
357.6
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
351.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
343.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
330.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
322.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
288.8
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
288.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
282.7
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
278.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
274.9
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
274.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
266.1
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
253.0
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
250.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
244.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
237.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
237.1
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
227.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
211.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
203.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
202.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
198.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
197.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
196.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
191.5
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
191.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
182.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
182.0
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
173.7
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
166.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
161.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
158.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
152.2
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
151.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
149.8
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
147.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
145.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
143.4
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
138.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
137.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
132.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
130.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
129.9
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
126.4
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
121.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
119.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
115.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
110.4
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
110.1
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
103.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
102.5
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
96.6
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
95.9
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
95.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
92.1
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
85.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
83.3
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
78.1
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
75.7
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
71.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
67.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
63.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
61.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
57.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
54.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
53.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
51.2
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
49.6
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
49.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
46.3
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
44.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
43.9
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
42.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
38.2
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
35.5
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
33.8
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
32.1
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
31.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
28.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
28.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
19.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
15.8
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
9.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.