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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1082.3
Min pTPM: 39.1
Std pTPM: 228.8
Median pTPM: 347.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
1082.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
990.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
989.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
897.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
876.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
841.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
820.1
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
815.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
734.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
684.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
680.2
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
661.8
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
657.9
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
655.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
641.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
609.7
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
609.7
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
593.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
571.6
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
565.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
541.9
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
533.6
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
513.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
504.8
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
503.0
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
470.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
467.1
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
465.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
456.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
456.0
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
449.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
448.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
442.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
442.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
434.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
416.7
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
416.7
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
414.5
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
410.7
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
388.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
380.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
380.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
374.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
372.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
371.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
361.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
359.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
353.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
351.9
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
351.3
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
343.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
330.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
329.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
323.6
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
322.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
318.9
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
314.6
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
308.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
308.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
301.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
300.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
284.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
282.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
277.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
261.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
255.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
253.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
248.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
236.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
234.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
232.9
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
224.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
221.0
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
214.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
204.7
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
199.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
192.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
189.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
174.0
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
171.3
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
170.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
168.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
163.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
154.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
150.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
143.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
141.8
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
135.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
130.9
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
124.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
117.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
116.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
103.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
93.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
91.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
88.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
79.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
73.2
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
73.0
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
39.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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