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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1603.6
Min pTPM: 27.5
Std pTPM: 323.0
Median pTPM: 324.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
1603.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
1418.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
1109.6
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
1061.0
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
998.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
970.2
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
894.0
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
855.0
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
820.3
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
774.0
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
740.8
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
683.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
679.4
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
665.7
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
663.7
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
642.6
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
631.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
602.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
586.4
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
581.8
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
571.5
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
559.3
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
556.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
506.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
502.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
500.5
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
483.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
472.5
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
465.0
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
449.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
444.2
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
437.2
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
430.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
418.1
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
412.8
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
409.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
406.2
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
384.6
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
380.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
376.3
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
373.5
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
345.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
342.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
326.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
321.9
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
298.2
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
284.3
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
269.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
250.0
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
222.8
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
215.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
213.9
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
209.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
193.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
181.2
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
174.5
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
173.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
162.4
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
159.6
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
134.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
127.6
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
127.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
121.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
118.0
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
111.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
105.5
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
99.8
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
91.4
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
89.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
86.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
85.6
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
85.3
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
82.7
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
81.1
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
79.6
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
72.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
72.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
68.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
57.1
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
49.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
43.2
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
41.6
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
41.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
34.3
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
30.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
29.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
29.2
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
27.5
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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