We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1123.5
Min pTPM: 42.9
Std pTPM: 177.3
Median pTPM: 196.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
1123.5
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1047.0
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
748.7
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
609.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
587.0
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
545.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
531.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
499.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
470.7
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
420.4
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
411.0
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
396.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
389.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
381.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
377.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
363.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
361.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
356.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
351.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
336.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
311.0
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
306.6
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
303.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
285.2
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
283.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
274.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
274.5
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
273.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
271.6
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
269.4
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
262.5
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
262.1
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
259.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
247.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
245.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
244.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
238.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
233.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
230.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
227.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
225.6
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
219.3
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
216.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
214.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
209.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
209.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
206.6
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
199.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
198.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
196.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
195.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
195.5
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
194.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
193.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
193.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
192.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
191.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
185.3
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
182.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
181.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
180.5
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
180.1
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
176.6
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
176.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
173.6
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
166.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
164.6
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
159.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
158.0
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
151.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
150.9
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
149.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
144.8
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
136.5
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
133.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
131.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
128.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
124.4
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
120.5
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
116.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
112.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
112.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
112.1
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
112.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
110.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
109.1
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
108.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
105.3
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
105.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
101.1
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
101.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
80.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
78.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
76.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
76.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
67.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
60.7
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
58.2
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
57.7
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
42.9
Show allShow less
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.