We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 55.6
Samples: 160
Max pTPM: 109.0
Min pTPM: 17.2
Std pTPM: 19.7
Median pTPM: 55.8
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
109.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
100.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
99.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
99.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
92.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
92.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
88.8
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
87.6
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
87.2
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
85.3
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
84.5
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
82.4
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
81.5
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
81.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
81.1
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
80.2
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
80.0
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
80.0
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
79.9
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
79.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
79.7
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
79.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
79.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
78.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
78.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
78.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
77.3
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
77.1
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
76.4
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
75.1
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
74.2
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
74.2
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
73.8
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
73.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
72.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
71.7
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
71.5
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
71.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
70.2
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
70.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
69.2
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
68.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
68.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
67.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
67.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
67.6
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
67.4
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
67.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
66.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
65.7
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
63.4
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
63.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
62.8
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
62.7
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
62.3
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
62.0
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
62.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
61.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
61.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
61.3
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
61.2
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
61.1
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
60.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
60.7
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
60.5
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
60.4
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
60.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
60.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
59.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
59.6
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
59.5
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
59.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
58.8
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
58.3
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
58.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
58.1
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
58.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
57.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
56.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
56.7
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
55.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
54.8
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
54.2
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
54.2
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
53.8
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
53.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
53.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
53.2
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
51.7
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
51.6
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
51.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
51.0
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
50.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
50.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
50.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
50.5
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
50.4
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
50.2
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
50.0
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
49.9
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
49.5
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
49.3
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
49.2
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
49.0
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
48.8
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
48.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
48.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
47.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
47.4
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
46.7
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
45.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
45.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
44.3
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
44.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
43.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
43.5
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
43.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
42.7
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
42.3
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
42.1
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
41.8
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
41.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
41.2
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
40.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
39.7
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
39.6
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
38.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
37.0
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
36.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
35.8
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
35.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
34.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
33.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
32.9
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
32.4
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
31.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
31.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
30.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
30.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
30.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
28.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
28.3
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
27.7
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
27.3
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
26.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
26.7
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
26.5
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
25.7
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
25.5
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
25.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
25.1
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
23.1
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
22.7
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
22.5
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
22.3
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
21.7
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
21.5
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
21.0
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
17.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
17.2
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.