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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 378.8
Min pTPM: 19.7
Std pTPM: 69.2
Median pTPM: 98.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
378.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
372.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
320.5
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
309.1
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
282.7
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
251.8
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
241.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
237.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
236.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
220.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
220.1
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
219.3
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
203.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
200.4
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
199.9
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
198.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
196.3
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
179.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
175.3
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
173.4
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
171.8
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
171.0
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
167.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
167.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
167.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
160.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
157.9
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
157.0
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
153.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
152.6
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
152.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
152.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
152.1
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
144.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
144.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
142.8
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
139.3
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
138.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
134.3
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
134.3
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
133.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
131.7
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
128.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
123.4
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
120.8
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
119.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
119.9
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
119.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
118.4
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
115.9
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
115.8
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
111.0
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
110.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
108.9
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
108.6
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
108.2
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
107.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
106.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
103.8
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
102.2
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
98.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
98.2
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
96.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
96.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
96.7
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
95.8
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
94.7
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
93.4
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
92.6
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
89.0
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
87.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
86.6
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
86.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
85.2
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
80.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
80.3
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
77.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
76.7
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
76.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
76.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
74.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
74.0
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
73.0
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
72.7
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
72.3
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
70.1
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
70.1
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
69.9
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
69.2
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
69.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
68.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
68.2
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
65.9
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
65.1
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
65.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
64.7
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
64.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
64.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
64.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
62.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
61.2
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
60.8
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
59.2
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
58.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
58.3
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
58.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
58.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
57.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
57.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
52.9
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
50.9
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
49.4
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
49.3
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
47.5
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
39.6
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
39.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
39.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
37.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
35.3
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
35.3
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
35.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
25.4
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
19.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.