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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA057790
Glial cells
Not detected
Neuronal cells
Not detected
Neuronal projections
High
Synapses
Not detected
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 356.9
Samples: 160
Max pTPM: 916.3
Min pTPM: 24.7
Std pTPM: 205.5
Median pTPM: 354.5
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
916.3
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
898.7
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
836.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
810.6
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
783.0
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
750.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
698.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
692.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
681.7
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
655.9
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
643.8
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
639.2
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
630.5
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
626.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
615.3
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
615.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
614.3
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
613.7
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
612.9
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
610.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
595.5
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
595.3
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
593.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
590.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
588.7
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
587.6
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
584.7
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
577.0
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
565.5
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
559.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
549.2
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
543.4
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
540.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
535.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
535.6
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
532.9
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
527.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
527.4
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
527.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
522.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
516.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
511.3
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
509.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
505.2
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
498.3
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
485.1
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
480.6
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
476.5
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
470.5
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
469.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
463.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
455.3
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
451.3
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
447.1
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
446.3
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
445.8
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
440.4
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
439.1
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
436.0
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
432.7
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
429.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
426.8
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
425.5
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
424.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
422.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
421.0
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
416.0
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
406.0
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
405.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
400.8
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
382.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
378.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
377.8
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
377.7
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
376.9
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
374.4
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
374.0
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
365.5
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
357.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
356.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
352.8
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
347.8
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
343.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
342.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
341.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
338.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
337.5
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
335.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
325.3
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
318.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
315.9
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
300.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
291.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
291.0
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
285.5
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
278.4
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
265.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
261.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
255.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
254.1
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
253.0
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
249.0
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
244.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
243.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
243.5
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
242.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
238.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
232.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
229.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
223.1
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
214.9
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
213.7
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
212.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
208.5
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
207.4
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
206.9
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
204.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
191.8
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
185.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
178.7
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
174.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
169.6
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
168.1
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
162.6
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
162.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
160.0
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
159.8
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
159.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
155.7
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
142.1
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
138.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
130.6
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
126.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
124.2
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
120.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
111.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
111.2
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
102.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
102.0
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
97.5
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
93.3
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
92.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
91.3
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
89.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
88.6
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
85.8
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
83.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
80.3
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
79.0
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
75.7
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
72.0
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
71.2
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
64.4
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
49.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
41.1
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
38.8
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
34.2
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
29.8
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
27.5
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
24.7
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.