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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA067773
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Not detected
Synapses
Medium
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 282.5
Min pTPM: 1.5
Std pTPM: 67.0
Median pTPM: 71.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
282.5
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
265.5
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
264.7
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
263.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
259.1
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
239.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
224.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
224.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
213.4
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
204.6
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
203.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
182.0
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
180.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
175.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
173.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
168.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
168.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
158.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
157.3
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
151.1
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
149.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
145.8
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
145.3
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
145.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
138.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
133.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
129.9
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
128.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
125.1
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
122.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
120.2
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
119.2
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
116.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
116.6
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
116.2
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
115.6
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
115.6
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
113.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
109.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
109.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
109.1
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
107.7
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
106.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
103.1
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
102.2
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
101.6
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
100.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
97.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
94.4
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
94.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
93.0
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
92.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
85.3
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
84.7
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
84.6
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
83.5
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
81.6
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
81.3
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
81.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
80.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
71.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
71.4
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
70.6
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
70.0
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
67.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
62.7
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
62.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
60.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
60.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
60.1
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
59.8
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
56.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
55.2
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
55.0
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
54.6
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
50.9
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
48.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
48.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
47.8
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
45.8
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
43.0
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
42.7
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
42.5
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
38.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
37.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
37.2
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
36.6
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
36.0
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
36.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
35.9
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
35.7
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
34.6
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
33.6
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
32.1
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
30.6
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
30.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
29.8
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
28.8
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
28.6
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
28.2
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
28.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
27.8
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
27.7
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
27.6
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
25.1
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
24.5
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
23.2
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
22.8
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
20.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
17.0
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
16.2
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
15.3
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
14.2
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
14.2
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
10.3
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
9.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
9.2
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
8.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
7.4
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
5.3
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
4.5
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
3.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.