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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA067773
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Not detected
Synapses
Low
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 100.1
Samples: 160
Max pTPM: 241.0
Min pTPM: 3.1
Std pTPM: 59.2
Median pTPM: 97.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
241.0
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
239.6
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
222.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
216.8
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
213.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
208.4
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
207.4
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
201.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
197.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
192.9
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
192.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
190.2
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
188.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
186.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
185.7
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
185.3
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
183.1
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
182.5
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
182.2
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
179.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
174.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
173.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
170.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
169.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
165.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
164.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
162.7
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
162.1
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
161.8
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
158.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
155.7
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
152.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
150.8
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
150.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
148.9
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
147.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
145.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
145.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
145.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
145.2
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
145.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
144.4
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
141.6
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
141.5
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
139.9
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
139.6
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
138.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
138.5
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
130.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
130.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
130.0
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
129.8
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
129.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
129.3
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
128.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
126.7
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
125.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
125.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
124.7
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
124.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
124.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
123.3
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
121.8
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
121.2
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
118.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
116.9
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
113.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
111.4
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
110.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
110.1
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
110.0
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
107.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
105.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
103.1
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
101.9
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
100.8
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
99.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
98.6
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
98.6
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
97.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
97.4
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
95.5
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
95.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
94.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
92.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
91.3
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
90.6
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
90.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
89.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
88.7
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
88.4
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
88.3
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
87.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
83.8
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
83.2
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
81.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
81.3
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
81.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
79.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
77.2
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
77.2
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
73.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
72.6
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
72.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
72.4
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
71.5
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
70.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
67.0
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
65.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
64.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
60.7
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
58.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
57.8
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
54.0
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
49.6
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
47.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
46.6
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
46.1
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
45.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
42.6
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
41.7
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
41.7
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
40.9
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
40.6
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
39.3
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
37.6
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
36.3
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
35.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
35.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
34.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
34.8
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
34.5
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
33.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
33.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
32.9
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
30.2
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
29.0
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
27.9
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
26.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
26.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
25.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
24.3
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
24.0
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
23.9
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
23.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
23.5
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
23.2
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
22.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
20.7
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
18.4
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
18.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
17.6
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
16.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
16.3
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
11.2
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
10.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
8.3
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
8.2
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
5.4
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
3.1
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.