We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 70.4
Samples: 160
Max pTPM: 219.3
Min pTPM: 9.7
Std pTPM: 37.1
Median pTPM: 66.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
219.3
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
182.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
160.8
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
146.5
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
136.3
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
135.0
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
134.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
130.7
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
129.4
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
128.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
126.5
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
125.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
124.6
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
121.9
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
120.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
120.6
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
119.5
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
118.4
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
116.2
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
114.6
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
113.1
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
113.0
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
111.9
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
110.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
109.0
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
106.3
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
106.3
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
105.1
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
103.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
102.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
102.7
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
102.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
102.5
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
101.8
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
100.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
99.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
98.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
96.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
93.5
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
93.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
93.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
93.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
92.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
91.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
89.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
89.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
89.3
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
89.0
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
88.9
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
88.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
88.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
87.2
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
87.2
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
86.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
84.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
83.6
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
82.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
82.0
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
81.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
80.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
80.8
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
80.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
79.3
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
79.0
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
77.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
77.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
77.6
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
76.8
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
75.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
74.9
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
74.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
73.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
72.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
71.0
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
69.9
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
69.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
68.8
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
67.4
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
66.8
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
66.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
66.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
65.8
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
65.6
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
65.5
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
64.9
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
64.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
64.4
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
63.7
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
62.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
61.7
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
61.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
61.6
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
61.1
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
61.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
60.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
60.0
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
59.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
58.2
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
57.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
57.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
56.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
56.7
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
53.7
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
53.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
53.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
52.1
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
51.6
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
51.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
51.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
50.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
48.0
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
47.9
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
47.5
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
47.4
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
45.6
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
45.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
44.6
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
43.8
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
42.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
41.8
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
41.7
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
40.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
39.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
38.6
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
38.4
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
36.8
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
36.6
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
34.4
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
31.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
31.2
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
31.0
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
30.7
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
30.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
28.6
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
28.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
28.4
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
28.1
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
27.9
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
27.8
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
27.7
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
26.4
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
25.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
25.5
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
23.1
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
23.0
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
22.8
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
22.6
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
22.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
22.0
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
18.8
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
18.3
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
17.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
16.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
16.3
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
15.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
14.6
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
10.3
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
10.1
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
10.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
9.7
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.