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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 4487.5
Min pTPM: 539.6
Std pTPM: 742.3
Median pTPM: 1464.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
4487.5
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
4319.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
3905.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
3611.8
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
3275.0
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
3188.5
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
3138.7
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
2932.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
2883.1
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
2882.6
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
2794.1
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
2694.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
2679.9
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
2658.6
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
2619.6
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
2577.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
2492.1
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
2470.6
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
2468.6
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
2301.6
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
2270.1
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
2239.0
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
2233.3
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
2231.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
2205.1
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
2198.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
2182.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
2170.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
2144.8
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
2097.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
2078.4
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
2034.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
2013.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
2000.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
1957.4
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
1934.1
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
1894.9
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
1815.7
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
1808.8
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
1796.2
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
1782.8
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
1737.9
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
1733.5
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
1701.8
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
1701.5
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
1695.5
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
1687.4
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
1685.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
1643.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
1643.7
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
1639.5
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
1638.2
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
1603.8
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
1571.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
1556.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
1548.4
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
1517.9
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
1500.5
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
1494.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
1494.0
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
1471.3
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
1464.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
1462.8
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
1451.7
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
1446.3
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
1443.9
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
1428.7
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
1426.7
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
1423.1
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
1421.2
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
1397.7
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
1388.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
1372.1
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
1370.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
1358.3
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
1347.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
1339.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
1332.0
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
1330.1
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
1328.7
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
1327.1
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
1308.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
1293.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
1290.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
1268.5
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
1249.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
1233.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
1213.4
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
1186.1
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1179.2
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
1140.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
1129.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
1128.8
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
1127.6
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
1127.4
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
1119.1
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
1114.4
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
1114.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
1108.9
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
1081.3
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
1080.5
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
1071.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
1052.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
1051.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
1046.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
1038.4
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
1023.0
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
1022.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
1000.6
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
975.2
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
948.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
937.9
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
909.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
890.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
845.5
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
829.0
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
820.6
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
814.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
788.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
758.2
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
679.0
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
638.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
539.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.