We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 850.0
Min pTPM: 0.0
Std pTPM: 156.5
Median pTPM: 65.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
850.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
616.8
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
456.4
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
456.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
437.7
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
419.8
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
391.9
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
345.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
339.2
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
326.7
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
313.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
303.0
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
293.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
286.8
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
274.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
272.9
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
256.3
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
241.3
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
227.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
210.2
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
200.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
184.6
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
175.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
166.6
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
165.4
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
154.4
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
147.0
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
143.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
139.8
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
139.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
136.6
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
119.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
112.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
105.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
102.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
96.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
96.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
95.9
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
89.5
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
89.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
84.6
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
76.3
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
69.6
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
67.8
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
62.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
51.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
49.5
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
48.9
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
43.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
39.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
33.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
33.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
32.6
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
26.4
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
25.9
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
23.9
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
23.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
22.2
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
20.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
20.3
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
17.5
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
17.2
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
17.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
15.0
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
13.0
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
11.7
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
11.2
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
10.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
10.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
7.6
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
6.7
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
5.1
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
3.4
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
2.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
2.7
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
2.4
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
1.9
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
1.4
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
1.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
0.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
0.6
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
0.4
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
0.2
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
0.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
0.1
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
0.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
0.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
0.0
Show allShow less
MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.