We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 77.1
Samples: 160
Max pTPM: 160.0
Min pTPM: 16.5
Std pTPM: 27.0
Median pTPM: 78.8
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
160.0
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
139.4
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
137.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
126.5
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
124.9
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
123.0
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
121.4
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
119.2
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
116.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
116.1
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
115.3
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
115.3
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
113.0
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
112.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
111.0
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
110.6
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
110.1
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
109.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
108.7
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
108.3
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
104.9
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
104.5
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
103.8
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
103.1
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
102.6
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
102.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
102.4
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
101.8
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
101.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
101.3
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
100.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
100.8
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
100.6
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
99.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
98.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
98.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
98.0
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
97.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
97.4
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
97.3
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
96.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
96.0
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
95.9
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
95.1
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
95.0
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
94.8
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
92.9
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
92.9
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
92.8
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
92.7
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
92.7
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
92.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
92.4
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
91.8
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
91.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
91.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
91.3
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
90.8
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
90.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
90.3
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
89.7
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
89.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
89.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
88.5
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
88.5
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
88.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
88.5
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
87.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
87.2
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
86.5
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
85.6
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
83.9
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
83.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
83.1
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
83.1
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
82.4
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
81.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
81.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
80.0
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
79.4
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
78.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
75.8
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
75.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
74.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
74.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
73.5
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
73.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
72.1
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
72.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
71.8
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
71.5
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
70.9
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
70.4
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
69.6
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
68.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
68.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
68.6
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
68.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
68.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
67.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
67.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
66.4
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
66.3
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
66.1
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
65.9
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
63.8
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
63.3
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
63.0
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
61.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
61.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
61.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
61.1
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
61.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
60.7
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
60.1
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
59.6
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
58.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
58.3
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
57.6
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
57.5
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
57.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
56.5
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
55.9
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
55.7
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
54.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
54.8
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
54.5
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
53.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
53.3
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
49.7
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
49.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
48.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
48.1
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
46.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
46.4
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
46.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
45.7
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
45.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
44.5
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
44.2
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
43.9
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
42.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
42.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
41.6
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
39.5
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
38.6
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
38.2
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
37.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
35.6
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
35.1
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
35.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
34.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
32.3
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
30.9
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
29.3
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
29.2
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
27.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
22.2
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
17.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
16.5
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.