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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA064128
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Not detected
Synapses
Not detected
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA064872
Glial cells
Not detected
Neuronal cells
Low
Neuronal projections
Not detected
Synapses
Not detected
HIPPOCAMPUS - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA067500
Glial cells
Not detected
Neuronal cells
Medium
Neuronal projections
Not detected
Synapses
Not detected
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 105.0
Min pTPM: 0.2
Std pTPM: 21.4
Median pTPM: 9.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
105.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
96.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
94.0
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
88.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
62.3
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
61.4
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
61.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
58.3
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
57.5
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
57.1
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
54.4
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
54.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
53.8
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
47.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
45.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
44.4
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
37.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
37.3
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
34.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
34.7
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
34.3
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
33.1
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
29.7
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
29.5
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
29.2
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
28.9
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
26.9
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
26.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
25.5
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
25.5
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
25.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
23.4
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
23.2
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
23.2
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
22.6
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
21.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
20.9
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
20.9
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
20.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
20.2
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
19.5
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
18.5
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
18.0
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
17.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
17.2
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
16.4
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
15.4
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
15.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
15.3
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
15.1
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
15.0
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
14.8
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
13.6
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
12.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
12.5
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
12.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
11.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
11.1
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
11.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
10.8
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
9.7
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
9.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
9.1
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
9.0
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
8.5
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
8.4
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
8.4
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
8.1
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
8.1
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
8.0
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
7.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
7.7
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
7.5
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
7.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
7.1
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
7.1
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
7.0
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
6.9
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
6.6
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
5.4
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
4.7
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
4.5
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
4.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
4.1
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
4.1
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
4.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
3.9
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
3.9
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
3.8
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
3.6
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
3.5
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
3.4
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
3.3
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
3.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
3.3
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
3.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
3.1
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
3.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
3.0
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
3.0
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
2.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
2.8
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
2.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
2.6
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
2.5
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
2.4
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
2.3
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
2.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
2.0
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
1.9
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
1.7
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
1.7
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
1.7
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
1.5
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
1.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
1.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
1.2
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
1.0
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
0.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
0.9
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
0.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
0.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
0.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.