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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 234.4
Min pTPM: 8.8
Std pTPM: 37.8
Median pTPM: 36.9
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
234.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
157.6
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
139.3
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
134.9
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
133.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
124.5
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
105.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
102.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
99.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
96.8
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
96.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
89.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
88.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
85.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
78.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
78.2
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
72.9
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
72.2
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
66.6
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
61.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
60.8
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
59.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
59.0
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
55.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
55.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
54.2
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
49.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
49.3
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
48.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
48.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
47.9
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
46.9
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
46.6
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
44.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
44.1
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
43.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
42.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
41.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
41.0
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
40.7
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
39.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
38.4
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
37.5
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
37.0
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
36.7
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
36.0
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
35.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
34.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
34.6
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
33.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
33.7
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
33.4
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
32.5
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
32.3
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
32.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
32.0
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
31.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
30.8
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
29.8
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
28.3
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
27.9
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
27.0
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
26.9
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
26.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
26.1
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
25.9
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
25.7
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
24.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
24.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
23.8
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
23.7
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
23.2
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
22.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
20.6
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
19.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
19.0
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
18.2
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
16.7
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
16.3
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
15.4
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
14.9
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
14.9
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
14.4
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
11.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
10.8
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
10.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
9.1
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
8.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.