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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 1860.8
Min pTPM: 5.1
Std pTPM: 199.4
Median pTPM: 62.2
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
1860.8
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
326.8
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
238.3
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
226.1
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
220.6
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
219.3
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
199.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
193.5
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
190.4
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
172.4
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
171.5
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
166.7
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
165.4
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
162.9
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
155.4
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
148.5
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
147.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
127.5
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
127.3
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
116.5
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
110.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
107.4
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
104.4
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
104.0
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
99.7
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
96.2
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
94.9
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
91.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
90.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
81.5
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
79.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
77.1
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
74.5
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
74.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
74.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
74.0
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
74.0
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
73.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
71.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
70.2
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
67.3
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
63.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
62.7
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
62.2
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
62.1
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
60.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
59.5
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
56.5
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
56.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
56.0
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
55.8
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
52.5
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
52.5
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
44.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
41.8
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
41.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
41.1
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
40.4
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
40.2
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
39.7
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
37.0
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
35.8
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
35.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
32.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
32.2
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
31.2
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
31.0
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
30.6
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
27.3
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
26.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
26.5
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
25.0
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
24.9
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
24.4
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
21.7
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
20.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
20.1
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
16.0
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
15.6
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
14.9
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
14.5
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
14.1
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
11.5
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
11.4
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
9.8
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
8.8
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
5.7
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
5.1
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.