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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 174.2
Min pTPM: 16.3
Std pTPM: 30.3
Median pTPM: 70.4
GTEX-WVLH-0011-R2A-SM-3MJFJ
50-59 years, male
174.2
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
142.7
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
118.8
GTEX-QVJO-0011-R2A-SM-2S1QK
60-69 years, female
115.0
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
114.8
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
113.4
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
112.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
112.3
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
111.2
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
106.1
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
105.3
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
105.1
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
104.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
103.2
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
100.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
99.0
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
97.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
97.3
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
96.7
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
96.3
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
96.2
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
95.9
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
93.7
GTEX-WL46-0011-R2A-SM-3LK6O
50-59 years, male
93.6
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
92.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
92.0
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
91.0
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
88.1
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
85.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
85.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
84.1
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
82.3
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
81.9
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
78.9
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
78.7
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
75.6
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
75.3
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
73.8
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
73.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
73.2
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
72.4
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
71.7
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
71.6
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
71.1
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
69.7
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
68.0
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
67.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
67.6
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
67.5
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
66.3
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
65.6
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
60.6
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
60.4
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
60.3
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
58.8
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
57.6
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
57.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
57.1
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
55.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
54.3
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
52.7
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
50.7
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
50.4
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
47.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
45.6
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
44.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
43.7
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
43.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
40.2
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
40.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
39.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
39.9
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
39.7
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
39.4
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
37.6
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
36.3
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
35.4
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
34.6
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
32.3
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
31.5
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
30.3
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
29.3
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
26.7
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
25.9
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
25.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
22.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
21.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
16.3
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.