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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 325.5
Min pTPM: 26.8
Std pTPM: 61.4
Median pTPM: 121.3
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
325.5
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
284.3
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
283.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
261.5
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
225.8
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
224.1
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
220.2
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
211.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
209.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
204.4
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
201.6
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
201.0
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
199.1
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
197.3
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
197.0
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
195.6
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
191.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
190.4
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
190.1
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
189.6
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
188.9
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
187.4
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
186.7
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
186.1
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
185.7
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
185.5
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
184.7
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
181.2
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
179.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
172.3
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
169.1
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
166.2
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
161.3
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
160.2
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
155.9
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
154.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
153.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
153.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
152.4
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
151.9
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
151.0
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
147.6
GTEX-RNOR-0011-R1A-SM-5SI8F
50-59 years, female
147.5
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
146.9
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
145.1
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
138.4
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
138.0
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
133.2
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
133.1
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
128.8
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
128.8
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
128.3
GTEX-N7MT-0011-R1a-SM-5SI7S
60-69 years, female
128.1
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
126.9
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
126.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
126.4
GTEX-15CHQ-0011-R1a-SM-6EU31
60-69 years, male
125.4
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
125.4
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
125.0
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
124.0
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
121.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
121.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
118.7
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
115.7
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
115.2
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
113.1
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
107.7
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
107.2
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
105.8
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
105.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
105.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
105.0
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
104.6
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
104.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
100.9
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
100.1
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
99.8
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
98.8
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
97.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
96.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
94.6
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
92.5
GTEX-14PJM-0011-R1a-SM-6EU2Z
50-59 years, female
91.6
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
91.6
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
88.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
79.8
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
78.7
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
78.5
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
75.4
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
72.6
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
72.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
72.0
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
71.3
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
68.2
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
68.0
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
66.9
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
66.0
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
65.5
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
64.4
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
63.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
61.3
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
60.3
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
57.4
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
56.0
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
54.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
54.0
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
53.2
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
51.9
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
48.9
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
48.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
48.5
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
47.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
47.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
46.5
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
43.2
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
42.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
35.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
34.2
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
31.8
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
30.1
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
30.0
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
27.8
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
26.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.