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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 7.6
Min pTPM: 0.1
Std pTPM: 1.7
Median pTPM: 2.5
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
7.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
7.6
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
7.3
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
6.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
6.3
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
5.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
5.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
5.4
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
5.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
5.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
5.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
5.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
5.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
4.8
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
4.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
4.7
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
4.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
4.4
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
4.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
4.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
4.2
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
4.1
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
4.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
4.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
4.0
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
3.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
3.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
3.8
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
3.8
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
3.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
3.5
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
3.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
3.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
3.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
3.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
3.3
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
3.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
3.2
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
3.2
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
3.1
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
3.1
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
3.0
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
3.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
2.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
2.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
2.7
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
2.6
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
2.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
2.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
2.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
2.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
2.4
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
2.4
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
2.2
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
2.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
2.2
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
2.2
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
2.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
2.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
2.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
2.1
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
2.1
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
2.1
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
2.0
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
2.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
2.0
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
1.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
1.9
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
1.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
1.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
1.8
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
1.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
1.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
1.4
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
1.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
1.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
1.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
1.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
1.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
1.0
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
0.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
0.9
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
0.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
0.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
0.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
0.7
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
0.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
0.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
0.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
0.7
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
0.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
0.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
0.6
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
0.6
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
0.6
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
0.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
0.3
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
0.3
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
0.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
0.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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