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A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Max pTPM: 653.4
Min pTPM: 10.1
Std pTPM: 143.9
Median pTPM: 154.9
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
653.4
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
553.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
508.0
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
484.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
454.7
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
441.5
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
438.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
436.1
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
414.9
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
403.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
402.3
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
398.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
397.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
397.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
392.3
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
390.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
365.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
346.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
314.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
308.3
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
296.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
292.5
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
291.4
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
288.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
286.4
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
285.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
282.3
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
278.9
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
274.3
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
270.8
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
264.6
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
263.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
258.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
258.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
250.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
217.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
216.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
210.9
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
206.8
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
204.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
196.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
195.3
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
192.8
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
179.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
177.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
175.7
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
161.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
160.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
157.7
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
155.9
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
153.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
151.0
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
149.7
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
148.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
147.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
146.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
140.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
129.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
126.0
GTEX-15EO6-0011-R4a-SM-7KULH
50-59 years, male
120.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
117.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
115.5
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
113.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
109.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
106.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
106.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
103.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
100.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
98.4
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
98.2
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
97.8
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
92.2
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
90.1
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
81.3
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
78.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
74.9
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
74.2
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
71.7
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
64.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
62.5
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
62.3
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
60.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
45.2
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
42.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
39.3
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
36.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
34.4
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
33.9
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
33.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
32.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
30.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
24.6
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
24.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
24.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
20.9
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
20.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
20.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
19.7
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
17.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
10.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. RPKM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
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