We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 30.9
Samples: 160
Max pTPM: 110.3
Min pTPM: 6.1
Std pTPM: 13.2
Median pTPM: 29.0
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
110.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
68.5
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
66.2
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
62.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
60.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
58.5
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
56.5
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
55.9
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
54.4
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
51.5
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
51.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
50.5
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
50.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
48.7
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
48.5
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
48.4
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
47.1
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
45.0
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
44.9
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
44.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
44.4
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
43.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
43.1
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
42.8
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
42.1
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
41.8
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
41.7
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
41.5
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
41.4
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
40.4
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
39.5
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
39.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
39.0
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
38.1
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
37.9
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
37.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
37.2
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
37.1
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
36.9
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
36.6
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
36.4
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
36.4
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
36.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
36.2
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
36.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
35.9
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
35.8
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
35.6
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
35.6
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
35.5
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
35.5
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
34.9
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
34.7
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
34.2
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
33.9
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
33.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
33.3
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
33.2
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
32.9
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
32.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
32.8
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
32.6
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
32.0
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
31.6
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
31.6
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
31.5
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
31.5
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
31.1
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
31.1
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
30.8
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
30.2
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
30.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
29.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
29.9
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
29.7
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
29.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
29.6
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
29.6
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
29.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
29.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
28.9
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
28.3
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
27.9
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
27.9
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
27.6
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
27.3
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
27.1
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
27.1
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
27.1
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
27.1
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
27.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
26.7
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
26.7
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
26.4
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
26.3
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
26.1
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
26.1
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
26.0
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
25.5
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
25.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
24.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
24.8
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
24.7
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
24.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
24.6
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
24.4
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
24.4
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
24.2
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
23.5
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
23.5
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
23.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
23.3
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
23.1
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
22.9
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
22.5
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
22.5
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
22.5
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
22.4
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
22.2
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
22.1
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
21.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
21.5
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
21.4
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
21.3
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
20.8
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
20.7
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
20.4
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
20.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
20.0
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
19.7
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
19.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
19.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
19.2
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
18.9
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
18.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
18.7
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
18.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
18.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
18.3
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
18.3
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
18.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
18.1
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
18.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
18.0
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
17.5
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
17.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
17.2
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
17.2
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
17.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
16.8
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
16.2
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
16.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
15.8
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
15.6
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
14.4
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
12.0
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
11.1
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
9.4
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
7.9
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
6.1
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.