We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 39.2
Samples: 160
Max pTPM: 100.6
Min pTPM: 4.7
Std pTPM: 17.3
Median pTPM: 38.1
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
100.6
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
100.5
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
83.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
81.1
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
77.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
76.6
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
72.7
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
72.0
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
71.8
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
68.2
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
66.8
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
66.5
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
65.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
62.9
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
61.9
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
61.8
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
61.4
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
60.3
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
58.5
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
58.1
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
57.2
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
57.0
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
56.5
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
56.4
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
55.7
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
55.7
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
55.4
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
55.3
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
54.7
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
53.8
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
52.5
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
52.5
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
52.4
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
50.8
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
50.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
50.2
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
50.1
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
49.5
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
48.6
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
48.3
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
48.1
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
48.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
47.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
47.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
47.2
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
47.0
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
46.8
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
46.6
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
46.1
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
46.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
45.8
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
45.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
45.6
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
45.1
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
44.7
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
44.0
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
43.6
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
43.4
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
43.0
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
42.7
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
42.0
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
41.7
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
41.5
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
40.9
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
40.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
39.9
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
39.8
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
39.8
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
39.7
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
39.2
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
39.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
38.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
38.7
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
38.7
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
38.5
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
38.4
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
38.4
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
38.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
38.2
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
38.2
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
38.0
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
37.9
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
37.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
37.6
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
37.1
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
36.9
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
36.9
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
36.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
36.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
35.9
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
35.6
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
35.4
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
35.0
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
34.9
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
34.9
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
34.4
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
34.3
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
34.0
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
33.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
33.8
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
33.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
33.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
32.5
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
32.3
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
31.7
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
31.7
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
31.3
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
30.7
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
30.0
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
29.7
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
29.6
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
29.5
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
29.4
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
28.7
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
28.6
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
28.3
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
27.6
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
27.5
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
27.1
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
26.9
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
26.8
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
26.6
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
26.5
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
25.9
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
25.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
24.9
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
24.3
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
24.3
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
24.2
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
23.8
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
22.2
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
21.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
21.9
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
21.6
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
21.2
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
21.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
20.8
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
20.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
20.2
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
20.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
20.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
19.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
19.8
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
18.6
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
18.3
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
18.2
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
18.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
16.7
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
16.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
15.9
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
15.9
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
15.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
14.1
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
12.8
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
12.3
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
10.5
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
10.5
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
7.8
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
5.9
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
4.7
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.