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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA051082
Glial cells
Not detected
Neuronal cells
High
Neuronal projections
Not detected
Synapses
Medium
CAUDATE - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 19.3
Samples: 160
Max pTPM: 58.1
Min pTPM: 0.4
Std pTPM: 13.4
Median pTPM: 18.8
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
58.1
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
53.6
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
49.4
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
45.8
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
45.6
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
44.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
42.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
41.6
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
41.2
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
41.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
40.6
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
40.5
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
40.3
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
40.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
39.3
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
38.7
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
38.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
37.8
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
37.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
36.5
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
35.6
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
35.3
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
34.5
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
34.3
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
33.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
33.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
32.7
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
32.4
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
32.3
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
31.9
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
31.9
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
31.3
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
30.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
30.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
30.4
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
29.1
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
29.1
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
28.8
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
28.8
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
28.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
28.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
27.8
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
27.8
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
27.7
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
27.6
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
27.0
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
27.0
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
26.7
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
26.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
26.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
26.4
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
26.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
26.2
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
26.1
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
25.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
25.9
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
25.8
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
25.4
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
24.8
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
24.8
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
24.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
24.4
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
24.1
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
23.7
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
23.6
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
23.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
23.2
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
22.0
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
21.7
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
21.3
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
21.2
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
21.1
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
20.7
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
20.4
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
20.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
20.3
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
20.1
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
19.7
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
19.5
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
19.0
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
18.6
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
18.4
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
18.2
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
18.1
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
17.5
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
17.4
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
17.2
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
16.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
16.4
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
16.2
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
15.3
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
15.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
14.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
14.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
14.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
13.9
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
13.8
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
13.2
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
13.0
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
12.4
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
12.0
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
11.9
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
11.5
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
11.2
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
11.1
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
10.6
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
10.2
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
10.1
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
10.0
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
10.0
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
9.7
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
9.6
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
9.2
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
8.6
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
7.9
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
7.7
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
7.5
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
7.1
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
7.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
6.7
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
6.7
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
6.7
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
6.4
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
6.3
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
5.8
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
5.3
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
5.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
5.1
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
4.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
4.2
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
4.1
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
4.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
4.1
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
3.8
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
3.7
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
3.7
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
3.5
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
3.1
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
3.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
3.0
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
3.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
2.8
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
2.6
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
2.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
2.6
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
2.3
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
2.3
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
1.9
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
1.8
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
1.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
1.5
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
1.5
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
1.4
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
1.1
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
1.0
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
1.0
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
1.0
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
0.9
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
0.6
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
0.4
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CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.