We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 69.1
Samples: 160
Max pTPM: 331.3
Min pTPM: 4.7
Std pTPM: 49.6
Median pTPM: 56.2
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
331.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
305.6
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
219.2
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
207.6
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
168.9
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
166.9
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
166.6
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
157.4
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
157.0
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
154.4
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
154.3
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
153.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
149.9
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
149.2
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
138.0
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
133.3
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
132.4
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
131.9
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
130.3
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
129.6
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
124.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
121.4
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
105.2
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
104.0
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
103.5
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
103.0
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
103.0
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
101.5
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
101.3
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
101.1
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
98.5
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
94.4
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
94.1
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
93.9
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
91.9
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
91.0
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
89.6
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
89.4
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
89.0
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
88.7
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
88.4
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
86.2
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
86.1
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
84.3
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
83.7
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
82.2
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
80.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
79.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
79.6
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
77.2
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
76.0
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
75.8
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
74.0
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
73.1
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
71.7
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
69.2
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
69.0
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
67.1
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
66.8
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
66.0
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
65.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
64.6
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
64.6
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
64.5
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
64.2
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
63.9
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
63.7
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
63.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
63.1
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
62.7
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
62.5
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
61.9
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
61.8
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
60.4
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
59.9
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
59.7
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
57.7
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
57.6
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
56.7
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
56.6
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
55.7
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
54.9
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
54.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
54.4
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
51.9
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
51.2
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
50.7
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
50.7
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
50.7
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
49.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
49.5
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
49.4
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
48.7
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
48.3
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
48.1
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
47.4
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
46.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
46.5
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
46.2
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
46.1
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
45.9
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
44.0
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
43.7
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
43.4
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
43.0
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
42.5
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
41.4
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
41.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
41.3
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
40.9
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
40.5
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
40.1
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
40.1
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
39.7
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
39.6
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
37.8
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
37.6
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
37.5
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
37.5
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
37.2
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
36.5
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
35.8
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
35.6
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
35.4
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
35.1
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
34.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
33.7
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
33.6
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
33.4
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
33.2
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
32.4
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
31.7
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
31.5
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
30.4
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
29.6
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
29.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
28.4
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
28.2
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
27.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
26.2
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
26.2
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
25.6
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
25.4
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
24.8
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
24.8
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
24.7
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
24.5
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
24.1
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
24.1
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
24.0
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
23.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
20.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
20.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
18.5
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
17.3
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
17.1
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
11.9
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
6.6
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
6.4
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
4.7
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.