We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression (NX) levels for human tissues was created by combining the data from these three transcriptomics datasets (HPA, GTEx and FANTOM5).
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high. This score is based on the staining intensity and fraction of stained cells.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as average pTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.
Brain - Caudate (basal ganglia) Average pTPM: 4026.9
Samples: 160
Max pTPM: 20165.1
Min pTPM: 789.7
Std pTPM: 2777.0
Median pTPM: 3220.4
GTEX-X4XX-0011-R5A-SM-46MWN
60-69 years, male
20165.1
GTEX-12WSA-0011-R5b-SM-5GU5I
60-69 years, male
14163.3
GTEX-QMR6-0011-R5A-SM-32PKT
50-59 years, male
13399.5
GTEX-WL46-0011-R5A-SM-3LK6V
50-59 years, male
12256.0
GTEX-QDT8-0011-R5A-SM-32PKN
30-39 years, female
11778.4
GTEX-11UD1-0011-R5b-SM-5P9FP
40-49 years, female
11695.0
GTEX-13NYB-0011-R5a-SM-5MR45
40-49 years, male
9375.5
GTEX-ZDXO-0011-R5a-SM-4WKG5
60-69 years, male
9276.8
GTEX-17HII-0011-R5a-SM-7LG51
50-59 years, male
8796.2
GTEX-12WSH-0011-R5b-SM-5P9F3
50-59 years, male
8615.3
GTEX-Z93S-0011-R5b-SM-4RGNI
50-59 years, male
8195.0
GTEX-R55E-0011-R5A-SM-2TC5N
20-29 years, male
7781.0
GTEX-13FHP-0011-R5b-SM-5LZY2
50-59 years, male
7715.2
GTEX-13OVJ-0011-R5a-SM-5P9H7
50-59 years, female
7575.7
GTEX-13O3O-0011-R5b-SM-5KM44
60-69 years, female
7478.3
GTEX-YJ89-0011-R5a-SM-4V6GM
60-69 years, male
7404.2
GTEX-X585-0011-R5A-SM-46MVI
50-59 years, male
7238.3
GTEX-NPJ7-0011-R5a-SM-33HBK
60-69 years, female
7180.5
GTEX-N7MS-0011-R5a-SM-2HMK8
60-69 years, male
7034.7
GTEX-YFC4-0011-R5a-SM-4RGLR
40-49 years, female
6884.7
GTEX-13CF2-0011-R5a-SM-5LZWS
60-69 years, male
6564.7
GTEX-WWYW-0011-R5A-SM-3NB3E
50-59 years, female
6491.1
GTEX-17EVP-0011-R5b-SM-7DHKW
40-49 years, male
6262.5
GTEX-17HHY-0011-R5b-SM-79OMZ
50-59 years, male
6209.9
GTEX-17MF6-0011-R5a-SM-731BA
40-49 years, male
6202.5
GTEX-1A3MX-0011-R5a-SM-79OM5
60-69 years, male
6045.8
GTEX-11NV4-0011-R5a-SM-5NQ88
60-69 years, male
5891.5
GTEX-139T8-0011-R5b-SM-5J1MO
60-69 years, male
5880.2
GTEX-17HG3-0011-R5a-SM-7DUEW
30-39 years, female
5867.0
GTEX-18465-0011-R5a-SM-72D5J
50-59 years, male
5838.6
GTEX-PVOW-0011-R5A-SM-32PL7
40-49 years, male
5711.8
GTEX-ZF28-0011-R5a-SM-4WWCZ
60-69 years, male
5693.2
GTEX-144GL-0011-R5b-SM-5PNUJ
50-59 years, male
5544.3
GTEX-16Z82-0011-R5a-SM-7EPGB
60-69 years, male
5479.7
GTEX-13PL6-0011-R5b-SM-5O9BI
40-49 years, female
5346.9
GTEX-NL3H-0011-R5a-SM-2I3GB
60-69 years, male
5302.7
GTEX-14JG1-0011-R5a-SM-62LED
40-49 years, male
5247.7
GTEX-ZAB4-0011-R5a-SM-4SOKC
40-49 years, male
5211.1
GTEX-14E6D-0011-R5b-SM-69LQR
50-59 years, male
5194.1
GTEX-QVJO-0011-R5A-SM-2S1QM
60-69 years, female
5193.9
GTEX-14DAQ-0011-R5b-SM-5YYAK
60-69 years, female
5117.8
GTEX-17F97-0011-R5a-SM-7LG4Z
50-59 years, male
4934.0
GTEX-16NPV-0011-R5a-SM-7EPGK
50-59 years, female
4859.7
GTEX-145LS-0011-R5a-SM-5SI65
60-69 years, female
4754.1
GTEX-11TUW-0011-R5b-SM-5BC6Q
60-69 years, male
4669.2
GTEX-183WM-0011-R5a-SM-718A4
70-79 years, female
4631.2
GTEX-12WSD-0011-R5b-SM-5CVNG
60-69 years, female
4557.6
GTEX-13OW5-0011-R5b-SM-5L3FR
60-69 years, male
4543.4
GTEX-17EVQ-0011-R5a-SM-7LT92
70-79 years, male
4523.7
GTEX-ZXG5-0011-R5b-SM-57WBN
60-69 years, male
4392.3
GTEX-15EO6-0011-R5b-SM-7KUDZ
50-59 years, male
4359.7
GTEX-13X6I-0011-R5a-SM-5PNWW
60-69 years, male
4267.3
GTEX-139TT-0011-R5b-SM-5K7W8
60-69 years, male
4224.3
GTEX-13OVH-0011-R5b-SM-5KM4L
70-79 years, male
4200.2
GTEX-1313W-0011-R5b-SM-5L3EP
50-59 years, female
4167.6
GTEX-145MG-0011-R5b-SM-5S2VU
50-59 years, male
4125.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M
60-69 years, male
4101.0
GTEX-13FLV-0011-R5a-SM-5LZWT
50-59 years, male
4080.8
GTEX-WZTO-0011-R5B-SM-3NMC5
40-49 years, male
4069.2
GTEX-13X6K-0011-R5b-SM-5PNUE
60-69 years, female
4057.3
GTEX-11H98-0011-R5b-SM-57WCF
50-59 years, male
4049.8
GTEX-12ZZX-0011-R5a-SM-5HL89
40-49 years, female
4039.3
GTEX-13JVG-0011-R5a-SM-5MR4O
60-69 years, male
4024.9
GTEX-13NYS-0011-R5a-SM-5MR4D
60-69 years, male
4014.4
GTEX-13FLW-0011-R5a-SM-5LZX6
50-59 years, male
4007.2
GTEX-13IVO-0011-R5a-SM-5L3CY
70-79 years, male
3994.7
GTEX-13FHO-0011-R5b-SM-5LZZ3
60-69 years, male
3971.6
GTEX-13OW8-0011-R5b-SM-5L3FQ
60-69 years, male
3647.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8
60-69 years, female
3644.5
GTEX-13SLW-0011-R5b-SM-5SI6Z
70-79 years, male
3620.2
GTEX-1AX9I-0011-R5b-SM-793DI
60-69 years, male
3580.3
GTEX-15DDE-0011-R5b-SM-7KULJ
50-59 years, female
3572.9
GTEX-15DYW-0011-R5a-SM-6M46W
60-69 years, female
3558.9
GTEX-14C39-0011-R5b-SM-5ZZV1
40-49 years, male
3461.6
GTEX-13SLX-0011-R5a-SM-5O9BV
50-59 years, female
3322.9
GTEX-13FXS-0011-R5b-SM-5LZYE
50-59 years, male
3288.9
GTEX-13RTJ-0011-R5a-SM-5P9HR
60-69 years, male
3275.7
GTEX-1445S-0011-R5a-SM-5PNUS
60-69 years, male
3236.5
GTEX-145MH-0011-R5a-SM-5P9JT
50-59 years, male
3229.5
GTEX-16YQH-0011-R5b-SM-7938U
30-39 years, male
3223.2
GTEX-13OW7-0011-R5b-SM-5O9DM
50-59 years, male
3217.6
GTEX-NPJ8-0011-R5a-SM-2HMJY
40-49 years, male
3124.0
GTEX-11WQC-0011-R5a-SM-5BC74
60-69 years, male
3116.7
GTEX-ZVZQ-0011-R5b-SM-57WDC
60-69 years, female
3113.8
GTEX-12WSF-0011-R5a-SM-5HL8K
70-79 years, male
3098.8
GTEX-ZUA1-0011-R5b-SM-51MTG
40-49 years, male
3079.7
GTEX-PWO3-0011-R5A-SM-2I5EZ
60-69 years, female
3077.4
GTEX-N7MT-0011-R5a-SM-2I3G6
60-69 years, female
3068.7
GTEX-12ZZY-0011-R5a-SM-5EGL9
60-69 years, male
3053.4
GTEX-13S7M-0011-R5b-SM-5P9HS
60-69 years, female
2935.0
GTEX-139TU-0011-R5b-SM-5L3E1
60-69 years, male
2922.7
GTEX-14ASI-0011-R5b-SM-6EU2M
60-69 years, male
2916.8
GTEX-UTHO-0011-R5A-SM-3GIJD
60-69 years, male
2910.4
GTEX-X261-0011-R5A-SM-3NMB4
50-59 years, male
2887.2
GTEX-S7PM-0011-R5A-SM-3NM8G
60-69 years, male
2853.8
GTEX-14BIN-0011-R5b-SM-5SI78
50-59 years, female
2801.9
GTEX-13PVQ-0011-R5b-SM-5O9DI
50-59 years, male
2784.6
GTEX-12ZZW-0011-R5a-SM-5DUVN
50-59 years, male
2762.9
GTEX-14BIM-0011-R5b-SM-5S2RM
60-69 years, female
2746.5
GTEX-13NZA-0011-R5b-SM-5KM4K
60-69 years, male
2698.9
GTEX-RU72-0011-R5A-SM-2TF6U
50-59 years, female
2680.9
GTEX-ZVT3-0011-R5a-SM-51MSI
60-69 years, female
2659.6
GTEX-NL4W-0011-R5a-SM-2I3GD
50-59 years, male
2607.6
GTEX-ZE7O-0011-R5a-SM-57WBO
50-59 years, female
2463.2
GTEX-WVLH-0011-R5A-SM-3MJFW
50-59 years, male
2440.2
GTEX-15CHQ-0011-R5b-SM-6AJAN
60-69 years, male
2437.1
GTEX-T5JC-0011-R5A-SM-32PLK
20-29 years, male
2414.9
GTEX-13O3Q-0011-R5b-SM-5P9H4
50-59 years, male
2352.3
GTEX-ZE9C-0011-R5a-SM-5EGLO
60-69 years, male
2349.1
GTEX-RVPV-0011-R5A-SM-2TF69
60-69 years, male
2346.8
GTEX-132Q8-0011-R5a-SM-5IJDM
60-69 years, male
2344.9
GTEX-139TS-0011-R5b-SM-5J2MZ
60-69 years, male
2335.0
GTEX-Y8DK-0011-R5B-SM-4RTW6
60-69 years, male
2322.0
GTEX-14753-0011-R5a-SM-5S2VW
60-69 years, male
2321.2
GTEX-14PJO-0011-R5a-SM-6AJBZ
60-69 years, male
2301.5
GTEX-T6MN-0011-R5A-SM-32QPD
50-59 years, male
2226.3
GTEX-18464-0011-R5b-SM-718A6
50-59 years, male
2189.8
GTEX-14LLW-0011-R5b-SM-5ZZU6
70-79 years, female
2150.3
GTEX-1B8SF-0011-R5a-SM-79OOO
60-69 years, male
2147.4
GTEX-14PQA-0011-R5b-SM-6AJC2
50-59 years, female
2140.2
GTEX-Q2AG-0011-R5A-SM-2HMJH
40-49 years, female
2138.6
GTEX-1477Z-0011-R5b-SM-5PNUO
60-69 years, male
2136.7
GTEX-14PN4-0011-R5a-SM-686ZV
50-59 years, male
2127.3
GTEX-14ABY-0011-R5b-SM-5SI7B
50-59 years, male
2121.0
GTEX-1B8L1-0011-R5a-SM-7DHN5
60-69 years, male
2100.3
GTEX-13112-0011-R5b-SM-5DUV8
50-59 years, male
2090.5
GTEX-OXRN-0011-R5A-SM-2I5EF
50-59 years, male
2044.0
GTEX-WHSE-0011-R5A-SM-3P5ZO
20-29 years, male
2020.9
GTEX-13OVL-0011-R5b-SM-5L3FU
50-59 years, male
2008.9
GTEX-14BMV-0011-R5b-SM-62LFT
50-59 years, male
1993.7
GTEX-13OW6-0011-R5a-SM-5O9BK
50-59 years, male
1964.7
GTEX-OXRO-0011-R5A-SM-2I5EG
60-69 years, female
1941.9
GTEX-12WSC-0011-R5b-SM-5CVNS
50-59 years, male
1928.0
GTEX-ZV68-0011-R5a-SM-4YCDW
50-59 years, female
1917.0
GTEX-1A8G6-0011-R5b-SM-7IGQG
60-69 years, male
1890.4
GTEX-15DCD-0011-R5a-SM-69LPC
70-79 years, female
1887.5
GTEX-15G19-0011-R5b-SM-6M46P
60-69 years, male
1846.8
GTEX-P44H-0011-R5A-SM-2XCEX
40-49 years, male
1823.0
GTEX-13CZV-0011-R5a-SM-5K7XA
60-69 years, male
1812.6
GTEX-15SHU-0011-R5a-SM-7938Q
40-49 years, female
1807.1
GTEX-131YS-0011-R5b-SM-5K7YB
60-69 years, female
1722.9
GTEX-13N1W-0011-R5b-SM-5MR5Q
70-79 years, male
1656.0
GTEX-13PLJ-0011-R5a-SM-5O9BG
60-69 years, female
1621.2
GTEX-11OF3-0011-R5a-SM-57WB4
60-69 years, male
1574.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y
60-69 years, male
1573.5
GTEX-13VXU-0011-R5a-SM-5O9D7
50-59 years, male
1573.4
GTEX-XMD1-0011-R5A-SM-4AT47
60-69 years, male
1564.8
GTEX-13X6J-0011-R5b-SM-5PNWT
50-59 years, male
1561.3
GTEX-1399T-0011-R5b-SM-5IJDK
60-69 years, male
1509.8
GTEX-14JIY-0011-R5b-SM-62LE7
60-69 years, male
1467.8
GTEX-S7SE-0011-R5A-SM-2XCDA
50-59 years, male
1452.9
GTEX-13CIG-0011-R5b-SM-5L3F2
50-59 years, male
1359.6
GTEX-144GO-0011-R5a-SM-5PNUR
60-69 years, male
1359.4
GTEX-11GSP-0011-R5a-SM-57WBE
60-69 years, female
1269.3
GTEX-13G51-0011-R5a-SM-5L3EB
60-69 years, male
1266.4
GTEX-TSE9-0011-R5A-SM-3DB7J
60-69 years, female
1257.0
GTEX-13JUV-0011-R5a-SM-5LZY5
40-49 years, female
1163.4
GTEX-15ER7-0011-R5b-SM-6M46T
20-29 years, female
1083.7
GTEX-13N2G-0011-R5a-SM-5MR33
60-69 years, male
885.9
GTEX-T2IS-0011-R5A-SM-32QP4
20-29 years, female
789.7
Show allShow less
CAUDATE - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. pTPM values of the individual samples are presented next to the box plot.